Enzymes are biological catalysts that produce large increases in reaction rates and tend to be specific for certain reactants and products. 41661-47-6, Name is Piperidin-4-one, molecular formula is C5H9NO, belongs to piperidines compound. In a document, author is Kato, Atsushi, introduce the new discover, Computed Properties of C5H9NO.
Strategy for Designing Selective Lysosomal Acid alpha-Glucosidase Inhibitors: Binding Orientation and Influence on Selectivity
Deoxynojirimycin (DNJ) is the archetypal iminosugar, in which the configuration of the hydroxyl groups in the piperidine ring truly mimic those ofd-glucopyranose; DNJ and derivatives have beneficial effects as therapeutic agents, such as anti-diabetic and antiviral agents, and pharmacological chaperones for genetic disorders, because they have been shown to inhibit alpha-glucosidases from various sources. However, attempts to design a better molecule based solely on structural similarity cannot produce selectivity between alpha-glucosidases that are localized in multiple organs and tissues, because the differences of each sugar-recognition site are very subtle. In this study, we provide the first example of a design strategy for selective lysosomal acid alpha-glucosidase (GAA) inhibitors focusing on the alkyl chain storage site. Our design of alpha-1-C-heptyl-1,4-dideoxy-1,4-imino-l-arabinitol (LAB) produced a potent inhibitor of the GAA, with an IC(50)value of 0.44 mu M. It displayed a remarkable selectivity toward GAA (selectivity index value of 168.2). A molecular dynamic simulation study revealed that the ligand-binding conformation stability gradually improved with increasing length of the alpha-1-C-alkyl chain. It is noteworthy that alpha-1-C-heptyl-LAB formed clearly different interactions from DNJ and had favored hydrophobic interactions with Trp481, Phe525, and Met519 at the alkyl chain storage pocket of GAA. Moreover, a molecular docking study revealed that endoplasmic reticulum (ER) alpha-glucosidase II does not have enough space to accommodate these alkyl chains. Therefore, the design strategy focusing on the shape and acceptability of long alkyl chain at each alpha-glucosidase may lead to the creation of more selective and practically useful inhibitors.
Balanced chemical reaction does not necessarily reveal either the individual elementary reactions by which a reaction occurs or its rate law. In my other articles, you can also check out more blogs about 41661-47-6. Computed Properties of C5H9NO.
Reference:
Piperidine – Wikipedia,
,Piperidine | C5H11N – PubChem